Peptide synthesis

Overview of peptide synthesis in biochemistry

Peptide synthesis is a process in biochemistry that involves the creation of peptides, which are short chains of amino acids linked by peptide bonds. This process is fundamental in the study of proteins and enzymes, as peptides serve as the building blocks of these larger molecules. Peptide synthesis can be performed using various methods, each with its own advantages and applications.

Methods of Peptide Synthesis

Peptide synthesis can be broadly categorized into two main types: solid-phase peptide synthesis (SPPS) and liquid-phase peptide synthesis.

Solid-Phase Peptide Synthesis (SPPS)

File:Peptide synthesis.png

Diagram of solid-phase peptide synthesis.

SPPS is the most commonly used method for synthesizing peptides. It was developed by Robert Bruce Merrifield in 1963 and revolutionized the field of peptide chemistry. In SPPS, the peptide is assembled on a solid support, typically a resin, which simplifies the purification process. The synthesis proceeds through a series of cycles, each involving the addition of a single amino acid residue.

The key steps in SPPS include:

• Deprotection: Removal of the protecting group from the amino group of the growing peptide chain.
• Coupling: Addition of the next amino acid, which is activated to form a peptide bond with the free amino group.
• Cleavage: Once the peptide chain is complete, it is cleaved from the resin and further purified.

Liquid-Phase Peptide Synthesis

Liquid-phase peptide synthesis is an older method that involves the sequential addition of amino acids in solution. While it is less commonly used today due to the complexity of purification, it is still valuable for synthesizing very short peptides or when specific modifications are required.

Applications of Peptide Synthesis

Peptide synthesis is crucial in various fields of research and medicine. Some of the key applications include:

• Drug Development: Peptides are used as therapeutic agents in the treatment of diseases such as cancer, diabetes, and infectious diseases.
• Vaccine Development: Synthetic peptides are used to develop vaccines by mimicking antigenic determinants of pathogens.
• Biochemical Research: Peptides are used as tools to study protein-protein interactions, enzyme activity, and signal transduction pathways.

Challenges in Peptide Synthesis

Despite its widespread use, peptide synthesis presents several challenges:

• Racemization: The formation of D-amino acids during synthesis can lead to racemization, affecting the biological activity of the peptide.
• Aggregation: Peptides can aggregate during synthesis, leading to incomplete reactions and low yields.
• Purification: The purification of synthetic peptides can be difficult, especially for long sequences or those with hydrophobic residues.

Related Pages

• Amino acid synthesis
• Protein synthesis
• Enzyme
• Biochemistry