File:Wiki covid andorra4.png
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Summary
| DescriptionWiki covid andorra4.png |
English: Cumulative COVID-19 cases confirmed in Andorra |
| Date | |
| Source | Own work |
| Author | GeneParmesan66 |
Below is the R code used to generate this plot. It is modified from another script that pulls each case type file from Johns Hopkins so some of the organization is unnecessary.
# Libraries library(extrafont) library(tidyverse) library(janitor) library(here) library(lubridate) library(ggtext) library(ggrepel) # COVID Case Data --------------------------------------------------------- folder_url = "https://raw.githubusercontent.com/CSSEGISandData/COVID-19/master/csse_covid_19_data/csse_covid_19_time_series/" # files = c("confirmed", "recovered", "deaths") # Because each file is in the folder, paste together the filenames case_urls = str_c(folder_url, # e.g. time_series_covid19_confirmed_global.csv "time_series_covid19_", "confirmed", "_global.csv") %>% # Setting names so we can map over each file later # set_names(files) set_names("confirmed") covid_data = imap_dfr(case_urls, ~read_csv(file = .x), .id = "case_type") %>% select(`Province/State`, `Country/Region`, case_type, everything()) %>% filter(`Country/Region` == "Andorra") covid_pivot = covid_data %>% pivot_longer(cols = c(-1:-5), names_to = "date", values_to = "total_cases", names_transform = list(date = mdy)) %>% clean_names() # Make labels for the end of each quarter quarterly_labels = covid_pivot %>% group_by(quarter(date, with_year = T)) %>% filter(date == max(date)) # Plotting --------------------------------------------------------- line_graph = covid_pivot %>% ggplot(., aes(x = date, y = total_cases))+ geom_line(colour = "#1f77b4", size = 1.3)+ geom_text(data = quarterly_labels, aes(label = scales::comma(total_cases)), size = 6, colour ="#202122", family = "Arial",nudge_x = -9, nudge_y = 280)+ scale_y_continuous(labels = scales::comma, expand = expansion(add = c(25,0)))+ scale_x_date(date_breaks = "2 months", date_labels = "%b %y", expand = expansion())+ coord_cartesian(xlim = range(covid_pivot$date), ylim = range(covid_pivot$total_cases), clip = "off")+ labs(x = NULL, y = "No. of confirmed cases", title = "COVID-19 cases in Andorra", subtitle = str_c("Source: Johns Hopkins CSSE (as of ", stamp_date("Oct 20 1979")(today()), ")"))+ # this is a custom theme function, but theme_minimal() or your favourite theming function will do just as well! theme_wiki(md=T, base_size = 16, plot_margin = margin(20,80,50,50)) ggsave(line_graph, filename = here("plots", "wiki_covid_andorra.png"), dev = "png", width = 16, height = 8)
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2 February 2021
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| Date/Time | Thumbnail | Dimensions | User | Comment | |
|---|---|---|---|---|---|
| current | 07:55, 3 February 2021 | 4,800 × 2,400 (101 KB) | GeneParmesan66 | Add title and source |
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| Horizontal resolution | 118.11 dpc |
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| Vertical resolution | 118.11 dpc |
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