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{{Short description|A type of synthetic protein used in biotechnology and medicine}}
{{Short description|A synthetic protein technology used in research and diagnostics}}
{{Use dmy dates|date=October 2023}}


'''Affimers''' are a class of [[synthetic proteins]] that are engineered to bind to specific target molecules. They are used in a variety of [[biotechnology]] and [[medical]] applications, including [[diagnostics]], [[therapeutics]], and [[research]]. Affimers are an alternative to [[antibodies]] and have several advantages, such as stability, ease of production, and the ability to bind to a wide range of targets.
== Affimer ==
[[File:Affimer_image.png|thumb|right|Illustration of an Affimer molecule]]


==Structure and Function==
Affimers are a class of [[synthetic proteins]] that are engineered to bind to specific target molecules. They are used in a variety of applications, including [[biomedical research]], [[diagnostics]], and [[therapeutics]]. Affimers are designed to mimic the binding properties of [[antibodies]], but they offer several advantages over traditional antibodies, such as increased stability and ease of production.
Affimers are based on a small protein scaffold, typically derived from [[cysteine protease inhibitors]] or [[staphylococcal protein A]]. This scaffold is engineered to display a variable region that can be tailored to bind specific target molecules with high affinity and specificity. The small size and simple structure of affimers allow them to be produced in [[bacterial]] systems, making them cost-effective and scalable.


==Applications==
== Structure and Function ==
Affimers have a wide range of applications in the field of biotechnology and medicine:
Affimers are based on a small protein scaffold that can be engineered to display a variety of binding surfaces. This scaffold is typically derived from a naturally occurring protein, such as [[staphylococcal protein A]] or [[cystatin]]. The binding surface of an Affimer is created by introducing mutations into the scaffold, allowing it to interact specifically with a target molecule.


===Diagnostics===
The ability of Affimers to bind to their targets with high specificity and affinity makes them useful tools in [[molecular biology]]. They can be used to detect and quantify proteins, to purify proteins from complex mixtures, and to inhibit the function of target proteins in [[cellular assays]].
In diagnostics, affimers are used as [[biorecognition]] elements in [[biosensors]] and [[immunoassays]]. They can be engineered to detect specific [[biomarkers]] associated with diseases, providing a tool for early diagnosis and monitoring of disease progression.


===Therapeutics===
== Applications ==
Affimers are being explored as therapeutic agents due to their ability to specifically target and modulate the activity of proteins involved in disease processes. They can be used to inhibit [[protein-protein interactions]] or to deliver therapeutic payloads to specific cells or tissues.
Affimers have a wide range of applications in both research and clinical settings. In research, they are used as tools for [[protein purification]], [[immunoassays]], and [[immunoprecipitation]]. In diagnostics, Affimers can be used to develop sensitive and specific assays for the detection of [[biomarkers]] associated with diseases such as [[cancer]] and [[infectious diseases]].


===Research===
In therapeutics, Affimers are being explored as potential alternatives to antibodies for the treatment of diseases. Their small size and stability make them attractive candidates for drug development, particularly in cases where traditional antibodies are not suitable.
In research, affimers are used as tools to study protein function and interactions. They can be used to isolate and purify proteins, to visualize proteins in cells, and to modulate protein activity in [[cellular]] and [[animal models]].


==Advantages over Antibodies==
== Advantages over Antibodies ==
[[File:Affimer_image.png|thumb|left|Comparison of Affimer and antibody structures]]
Affimers offer several advantages over traditional antibodies:
Affimers offer several advantages over traditional antibodies:
* '''Stability''': Affimers are more stable than antibodies, making them suitable for use in harsh conditions.
* '''Production''': They can be produced in bacterial systems, which is faster and more cost-effective than the production of antibodies in mammalian cells.
* '''Versatility''': Affimers can be engineered to bind a wide range of targets, including those that are difficult for antibodies to recognize.


==Development and Engineering==
* '''Stability''': Affimers are more stable than antibodies, which makes them suitable for use in harsh conditions where antibodies might denature.
The development of affimers involves the selection of a suitable scaffold and the engineering of the variable region to achieve the desired binding properties. This process often involves [[phage display]] or other [[combinatorial library]] techniques to screen for affimers with high affinity and specificity for the target molecule.
* '''Production''': Affimers can be produced in [[bacterial expression systems]], which is more cost-effective and faster than the production of antibodies in [[mammalian cell culture]].
* '''Size''': The smaller size of Affimers allows them to penetrate tissues more easily, which can be advantageous in certain therapeutic applications.
* '''Engineering''': The ability to engineer Affimers with specific properties allows for the development of highly tailored binding molecules.


==Related pages==
== Related pages ==
* [[Antibody]]
* [[Antibody]]
* [[Protein engineering]]
* [[Protein engineering]]
* [[Biotechnology]]
* [[Biotechnology]]
* [[Therapeutic protein]]
* [[Molecular biology]]


==Gallery==
<gallery>
File:Affimer_image.png|Diagram of an Affimer structure
</gallery>
[[Category:Synthetic proteins]]
[[Category:Biotechnology]]
[[Category:Biotechnology]]
[[Category:Medical research]]
[[Category:Protein engineering]]

Latest revision as of 03:44, 13 February 2025

A synthetic protein technology used in research and diagnostics


Affimer[edit]

File:Affimer image.png
Illustration of an Affimer molecule

Affimers are a class of synthetic proteins that are engineered to bind to specific target molecules. They are used in a variety of applications, including biomedical research, diagnostics, and therapeutics. Affimers are designed to mimic the binding properties of antibodies, but they offer several advantages over traditional antibodies, such as increased stability and ease of production.

Structure and Function[edit]

Affimers are based on a small protein scaffold that can be engineered to display a variety of binding surfaces. This scaffold is typically derived from a naturally occurring protein, such as staphylococcal protein A or cystatin. The binding surface of an Affimer is created by introducing mutations into the scaffold, allowing it to interact specifically with a target molecule.

The ability of Affimers to bind to their targets with high specificity and affinity makes them useful tools in molecular biology. They can be used to detect and quantify proteins, to purify proteins from complex mixtures, and to inhibit the function of target proteins in cellular assays.

Applications[edit]

Affimers have a wide range of applications in both research and clinical settings. In research, they are used as tools for protein purification, immunoassays, and immunoprecipitation. In diagnostics, Affimers can be used to develop sensitive and specific assays for the detection of biomarkers associated with diseases such as cancer and infectious diseases.

In therapeutics, Affimers are being explored as potential alternatives to antibodies for the treatment of diseases. Their small size and stability make them attractive candidates for drug development, particularly in cases where traditional antibodies are not suitable.

Advantages over Antibodies[edit]

File:Affimer image.png
Comparison of Affimer and antibody structures

Affimers offer several advantages over traditional antibodies:

  • Stability: Affimers are more stable than antibodies, which makes them suitable for use in harsh conditions where antibodies might denature.
  • Production: Affimers can be produced in bacterial expression systems, which is more cost-effective and faster than the production of antibodies in mammalian cell culture.
  • Size: The smaller size of Affimers allows them to penetrate tissues more easily, which can be advantageous in certain therapeutic applications.
  • Engineering: The ability to engineer Affimers with specific properties allows for the development of highly tailored binding molecules.

Related pages[edit]